NeVibeCode · 252 items
MCP servers for Science and research
MCP servers for Science and research: what each one does, an install command and example prompts.
Zotero MCP MCP server Connect an AI agent to a Zotero library to search papers, read PDFs, add records, and work with annotations. Useful when research questions depend on your own collection.
CX Codex +1
★ 5,585repo stars
arxiv-mcp-server MCP server Connects your agent to arXiv papers to inspect original LaTeX sections, export BibTeX, and track topics locally without third-party cloud sync.
CX Codex +1
★ 3,235repo stars
PaperBanana MCP server Creates publication-ready academic diagrams and statistical plots from text descriptions using a multi-agent workflow.
CX Codex +1
★ 2,418repo stars
MATLAB MCP Server MCP server MathWorks' official MCP server lets an AI agent start MATLAB, write and run code, and check it for style and correctness.
CX Codex +1
★ 1,723repo stars
Hex Research MCP server Keeps a research graph of hypotheses, goals, runs, source quality and audits. Useful when you need to remember why a conclusion exists.
CX Codex +1
★ 584repo stars
DocsAgent — Zotero, Obsidian & Apple Notes MCP Server MCP server Provides local AI agents with fast search and read access across Zotero libraries, Obsidian vaults, and macOS Apple Notes.
CX Codex +1
★ 578repo stars
Equation.io MCP server Turns equations into interactive 2D and 3D graphs and returns a link that carries the whole graph state. Handy when a formula needs a picture in the reply.
CX Codex +1
★ 410repo stars
ClaudeR - RStudio MCP Server MCP server Connects an active RStudio or Positron session to Claude Code and other agents to run scripts, inspect loaded datasets, and capture plots.
CX Codex +1
★ 359repo stars
fojin — Buddhist Canon Tools MCP server Connects AI models to an open Buddhist text corpus with stable URN citations. Useful for searching canonical scriptures and comparing trilingual textual parallels.
CX Codex +1
★ 354repo stars
VisualTorch MCP server VisualTorch turns PyTorch model structure into architecture diagrams and animated GIFs. Use it when an agent needs to inspect a neural network visually.
CX Codex +1
★ 341repo stars
Jacobian MCP server Hands your agent a set of typed math operations: find one, run it, pass the result on. Useful when you need an exact answer instead of a guess.
CX Codex +1
★ 330repo stars
google-surf-mcp MCP server This MCP server searches the web, papers, and code, then stores results in a local project knowledge graph. Use it for research and codebase discovery.
CX Codex +1
★ 291repo stars
Alfanous - Quranic Search Engine MCP server Searches Quranic verses using Arabic text, Buckwalter transliteration, and linguistic filters. Useful when an assistant needs accurate script matching or verse analysis.
CX Codex +1
★ 286repo stars
stata-mcp MCP server An MCP server that lets your AI agent call local Stata for regressions, econometrics and paper replication. Your data and license stay on your machine.
CX Codex +1
★ 270repo stars
reddit-research-mcp MCP server Gives your assistant semantic search across 20,000+ subreddits, post and comment fetching, and saved feeds for monitoring.
CX Codex +1
★ 257repo stars
tooluniverse MCP server Connects AI agents to research literature, scientific databases, and computational biology tools. Useful for running automated research workflows in agent sessions.
CX Codex +1
★ 1,760repo stars
ITASCA MCP Server MCP server Connects AI agents to ITASCA geomechanics software to query syntax manuals, run numerical simulations, and inspect running models.
CX Codex +1
★ 224repo stars
FirstData MCP server FirstData helps an agent locate authoritative data sources from a natural-language query. Use it when you need primary evidence and a route back to the original material.
CX Codex +1
★ 185repo stars
Zotero MCP MCP server Give an AI assistant access to your Zotero library to find items, inspect metadata, and read PDF text. Useful when you want to work with sources without leaving your coding assistant.
CX Codex +1
★ 162repo stars
pubmed-mcp-server MCP server Search PubMed and Europe PMC, retrieve article details and available full text, and format references through an MCP-enabled coding agent.
CX Codex +1
★ 163repo stars
Free Search MCP server Searches across engines, fetches page text, and reads documents. Use it when an agent needs web sources without a search API key.
CX Codex +1
★ 159repo stars
U.S. Government Open Data MCP server Connect an AI agent to U.S. government APIs covering topics from the economy to health and legislation. Useful when a question calls for combining records from multiple agencies.
CX Codex +1
★ 113repo stars
infranodus-mcp-server-infranodus MCP server Converts text into knowledge graphs, pinpoints discourse gaps, and extracts topical clusters using graph science. Helps map research themes and structure content.
CX Codex +1
★ 104repo stars
paper-preflight MCP server Validates academic references in LaTeX, Word, and Markdown against scholarly databases like Crossref and PubMed. Catches retracted papers and bogus DOIs without LLM guesswork.
CX Codex +1
★ 113repo stars
Bibverify MCP server Validates BibTeX citations against DOI, arXiv, and academic registries. Useful when checking research bibliographies before submission.
CX Codex +1
★ 98repo stars
clinicaltrialsgov-mcp-server MCP server Connects AI assistants to the ClinicalTrials.gov registry to query studies, pull outcome data, and pre-screen trials for patient profiles. No API key needed.
CX Codex +1
★ 99repo stars
OmniSeek MCP server A local MCP server that fetches content from Bilibili, Zhihu, and academic citations where standard search falls short. Keeps all indexes on your own machine.
CX Codex +1
★ 95repo stars
Obsidian Vault MCP MCP server Connects Zotero, MinerU, and Obsidian to automate research workflows. Parses scientific PDFs into Markdown and saves structured analysis notes inside your vault.
CX Codex +1
★ 94repo stars
IlyaGusev-academia_mcp MCP server Search arXiv and ACL Anthology, find citations and references, and work with research PDFs. Useful when an agent needs sources for a research task.
CX Codex +1
★ 94repo stars
paper-format-agent MCP server Format academic DOCX files against a guide without rewriting their text. A content check can stop the save if body or table text changes.
CX Codex +1
★ 87repo stars
PaperBanana-CN MCP server Turns a research description into a methodology diagram and CSV or JSON data into a statistical plot, then scores the result.
CX Codex +1
★ 84repo stars
Patsnap Patent & Literature Search MCP server Search patent and research-paper collections with natural-language descriptions or filters, then retrieve selected records for your agent to analyze. Useful for exploring technology and literature together.
CX Codex +1
★ 85repo stars
OpenCaseLaw — Swiss Caselaw, Statutes & Doctrine MCP server Search Swiss court decisions and legislation, then trace citations between cases. Connect the server when an AI agent needs legal research across Swiss sources.
CX Codex +1
★ 75repo stars
Web Researcher MCP MCP server An MCP server for web search and link verification: your agent searches the whole web or a trusted list of sites and cites real sources.
CX Codex +1
★ 72repo stars
Silica Core MCP server Silica Core retrieves evidence from code, Markdown, PDF, and office files, returning paths, sections, lines, and passages. It fits local project research.
CX Codex +1
★ 70repo stars
Paper Distill MCP MCP server Searches across 11 academic databases, ranks papers using AI, and sends summaries directly to Zotero, Obsidian, or team chat channels.
CX Codex +1
★ 68repo stars
onecite MCP server Turns DOIs, arXiv IDs, ISBNs and URLs into BibTeX or CSL-JSON records. Handy when a draft has collected references in several formats.
CX Codex +1
★ 68repo stars
research-hub MCP server Connect literature, research evidence, results, and manuscripts in a local workspace. Hand tasks to AI and review its proposals.
CX Codex +1
★ 66repo stars
overleaf-mcp-server MCP server Connects coding agents to Overleaf projects through Git synchronization. It lets you inspect, update, and commit LaTeX files right from your chat.
CX Codex +1
★ 64repo stars
Zoteus MCP server Connects Claude Code to Zotero for library searches, PDF passages and formatted references. Useful when you want an agent to work with research sources in chat.
CX Codex +1
★ 62repo stars
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