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NeVibeCode · 3 items

Skills and MCP tagged “vcf”

polars-bio K-Dense-AI skill Genomic interval arithmetic on Polars DataFrames, plus readers and writers for formats from BED to CRAM. Built for coordinate-aware joins in a Python pipeline. Claude Code CX Codex Cursor +1 1,900installs pysam K-Dense-AI skill Guides agents through Python and HTSlib workflows for genomic files like BAM, CRAM, and VCF. Useful when extracting alignments, filtering reads, and computing coverage. Claude Code CX Codex Cursor +1 1,900installs genomic-coordinates K-Dense-AI skill Converts genomic coordinates between BED, VCF, and GTF formats, and normalises variant representations. Useful when reconciling coordinate systems, indels, and assembly contigs. Claude Code CX Codex Cursor +1 939installs

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