Skills and MCP tagged “nextflow”

dnanexus-integration K-Dense-AI skill Automates genomics workloads on DNAnexus using dx CLI, dxpy, and dxCompiler. Handy when building dxapp.json applets or importing Nextflow and WDL pipelines. Claude Code CX Codex Cursor +1 1,900installs latchbio-integration K-Dense-AI skill A skill that walks the agent through Latch work: Python SDK workflows, Nextflow and Snakemake packaging, image registration, run monitoring. Claude Code CX Codex Cursor +1 1,900installs nextflow K-Dense-AI skill Guides your AI agent in writing, running, and debugging Nextflow DSL2 pipelines and nf-core workflows on HPC or cloud runners. Claude Code CX Codex Cursor +1 1,400installs bulk-rnaseq K-Dense-AI skill Prepares bulk RNA-seq reads, Salmon, and STAR outputs into validated gene-level count matrices for differential expression in PyDESeq2. Claude Code CX Codex Cursor +1 1,400installs pacsomatic K-Dense-AI skill Prepares a matched tumor-normal run of nf-core/pacsomatic on PacBio HiFi data: builds the samplesheet, writes launch artifacts, submits the Nextflow driver to a scheduler. Claude Code CX Codex Cursor +1 1,400installs