Skills and MCP tagged “bed”

polars-bio K-Dense-AI skill Genomic interval arithmetic on Polars DataFrames, plus readers and writers for formats from BED to CRAM. Built for coordinate-aware joins in a Python pipeline. Claude Code CX Codex Cursor +1 1,900installs gtars K-Dense-AI skill Skill for genomic interval analysis, overlaps, consensus and coverage via Python, Rust and CLI. Requires Python 3.10+ and gtars 0.10.0; local tools run offline. Claude Code CX Codex Cursor +1 1,900installs geniml K-Dense-AI skill Checks BED and genomic-universe contracts, then plans Region2Vec and scEmbed runs. Use it before local genomic-interval analysis. Claude Code CX Codex Cursor +1 1,900installs genomic-coordinates K-Dense-AI skill Converts genomic coordinates between BED, VCF, and GTF formats, and normalises variant representations. Useful when reconciling coordinate systems, indels, and assembly contigs. Claude Code CX Codex Cursor +1 939installs