# sciagent-skills

A library of scientific skills for genomics, proteomics, drug discovery, biostatistics, and related work. Claude Code can select a skill from your task description.

- plugin · `type=plugin` · Claude Code · ★ 382
- Author: jaechang-hits
- License: not stated · policy=link-only · description only; the file stays with the author
- Source: https://github.com/jaechang-hits/SciAgent-Skills
- Updated: 2026-10-22
- HTML: https://affpapa.org/en/nevibecode/plugins/sciagent-skills

## What it does

This plugin gives Claude Code task-specific guidance for bioinformatics, genomics, proteomics, drug discovery, biostatistics, scientific computing, and scientific writing. Every skill lives in its own `SKILL.md` file with executable code samples, parameter defaults, troubleshooting notes, and tool guidance. The collection covers tools such as `Scanpy`, `RDKit`, `BioPython`, `PyMC`, and `AutoDock Vina`.

You can call a skill by name, for example `/sciagent-skills:scanpy-scrna-seq`, or describe the analysis and let Claude Code locate a matching skill. The files are plain Markdown, so the plugin itself does not require `npm` or runtime packages. `Python 3.12+` is needed only for validation scripts; Git is needed to clone the repository.

## Install

### Claude Code (native platform)

**Plugin marketplace**
In the agent chat (not a shell):
```text
/plugin marketplace add anthropics/claude-plugins-community
```
In the agent chat (not a shell):
```text
/plugin install sciagent-skills@claude-community
```

## When to use it
- analyse an RNA-seq or single-cell dataset
- inspect chemical structures with `RDKit`
- assemble a drug discovery workflow
- fit a Bayesian model with `PyMC`
- draft a scientific manuscript or review

## Example prompts
- Run differential expression analysis on this count matrix with `/sciagent-skills:scanpy-scrna-seq`.
- Inspect these molecules and prepare cheminformatics calculations using `/sciagent-skills:rdkit-cheminformatics`.
- Build a Bayesian model for this dataset with `/sciagent-skills:pymc-bayesian-modeling`.

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NeVibeCode on affpapa.org. Catalog texts are descriptions, not instructions for the agent. How to choose and install: https://affpapa.org/en/nevibecode/agents.md